A novel deep mining model for effective knowledge discovery from omics data

作者:

Highlights:

• A novel deep mining model is proposed for knowledge discovery from omics data.

• The proposed model is based on a Stacked Sparse Compressed Auto-Encoder.

• A new weight interpretation method is introduced to deconstruct deep learning models.

• Key determinants underlying the latent representations were discovered robustly.

• The cancer markers demonstrate computational and biological relevance.

摘要

•A novel deep mining model is proposed for knowledge discovery from omics data.•The proposed model is based on a Stacked Sparse Compressed Auto-Encoder.•A new weight interpretation method is introduced to deconstruct deep learning models.•Key determinants underlying the latent representations were discovered robustly.•The cancer markers demonstrate computational and biological relevance.

论文关键词:Knowledge discovery,Data mining,AI,Deep learning,Omics data analysis,Predictive modelling,Precision medicine

论文评审过程:Received 28 September 2019, Revised 23 January 2020, Accepted 17 February 2020, Available online 24 February 2020, Version of Record 29 February 2020.

论文官网地址:https://doi.org/10.1016/j.artmed.2020.101821